Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 AC132938.5-201ENST00000624980 1813 ntBASIC18.68■□□□□ 0.58
TTC39CQ8N584 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 AL020989.1-201ENST00000422979 469 ntBASIC18.68■□□□□ 0.58
TTC39CQ8N584 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 SAPCD2P3-201ENST00000455031 850 ntBASIC18.68■□□□□ 0.58
TTC39CQ8N584 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TTC39CQ8N584 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TTC39CQ8N584 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 SPDYE21P-201ENST00000413323 827 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 AL450487.1-201ENST00000426799 995 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 SIGLEC30P-201ENST00000455569 941 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 IFNL4P1-201ENST00000607083 540 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 AP001269.4-201ENST00000609611 512 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 AL691432.3-201ENST00000621860 400 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 AL355877.3-201ENST00000622820 899 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 AC012313.10-201ENST00000623509 926 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 AL139288.1-201ENST00000623748 933 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 LYSMD4-203ENST00000378904 2122 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39CQ8N584 AC079776.2-201ENST00000641154 1609 ntBASIC18.67■□□□□ 0.58
TTC39CQ8N584 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39CQ8N584 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 AC046185.3-201ENST00000623228 1824 ntBASIC18.66■□□□□ 0.58
TTC39CQ8N584 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 SCARNA2-201ENST00000458748 420 ntBASIC18.66■□□□□ 0.58
TTC39CQ8N584 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 LINC00896-202ENST00000609602 2128 ntBASIC18.66■□□□□ 0.58
TTC39CQ8N584 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TTC39CQ8N584 AC067852.2-201ENST00000590513 2313 ntBASIC18.66■□□□□ 0.58
TTC39CQ8N584 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39CQ8N584 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39CQ8N584 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TTC39CQ8N584 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms