Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01561Q8N1V8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 AC096633.1-201ENST00000422446 749 ntBASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 NAPSB-206ENST00000562112 1266 ntBASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC01561Q8N1V8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AC103702.1-201ENST00000548801 2630 ntBASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 LINC02012-201ENST00000608206 1725 ntBASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01561Q8N1V8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms