Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 CEND1P1-201ENST00000451006 455 ntBASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 AC138761.1-201ENST00000584393 385 ntBASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RP1L1Q8IWN7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.14
RP1L1Q8IWN7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AC138932.1-201ENST00000534164 6830 ntBASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 COX20P2-201ENST00000452636 358 ntBASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 HLA-J-202ENST00000469281 1241 ntBASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.89■□□□□ 0.13
RP1L1Q8IWN7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 KRT8P47-201ENST00000604727 1398 ntBASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 AC010654.1-201ENST00000615722 808 ntBASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 AC092902.6-201ENST00000641783 218 ntBASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 GPR89P-201ENST00000407924 1495 ntBASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 LINC01126-201ENST00000623515 1646 ntBASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.88■□□□□ 0.13
RP1L1Q8IWN7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RP1L1Q8IWN7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RP1L1Q8IWN7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RP1L1Q8IWN7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RP1L1Q8IWN7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms