Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 KRT8P11-201ENST00000409686 1436 ntBASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 MIR638-201ENST00000385237 100 ntBASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 DUSP5P2-201ENST00000426873 1033 ntBASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 AC105036.2-201ENST00000569468 176 ntBASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 AC004264.1-201ENST00000608354 794 ntBASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 AC144831.1-201ENST00000573312 2656 ntBASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.96■□□□□ 0.15
CROCCP3Q8IVE0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.96■□□□□ 0.14
CROCCP3Q8IVE0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms