Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 GUSBP12-201ENST00000513727 720 ntBASIC16.27■□□□□ 0.2
VRK2Q86Y07 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
VRK2Q86Y07 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VRK2Q86Y07 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VRK2Q86Y07 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VRK2Q86Y07 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VRK2Q86Y07 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.27■□□□□ 0.19
VRK2Q86Y07 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 KRT18P21-201ENST00000515767 1272 ntBASIC16.26■□□□□ 0.19
VRK2Q86Y07 AC124864.1-201ENST00000623408 392 ntBASIC16.26■□□□□ 0.19
VRK2Q86Y07 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 AD000864.1-201ENST00000624076 2295 ntBASIC16.26■□□□□ 0.19
VRK2Q86Y07 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VRK2Q86Y07 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.26■□□□□ 0.19
VRK2Q86Y07 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 AC097374.2-201ENST00000618617 1306 ntBASIC16.25■□□□□ 0.19
VRK2Q86Y07 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 RN7SL606P-201ENST00000472779 293 ntBASIC16.25■□□□□ 0.19
VRK2Q86Y07 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VRK2Q86Y07 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.25■□□□□ 0.19
VRK2Q86Y07 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms