Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC093010.1-201ENST00000473625 1624 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC006116.8-202ENST00000587620 1550 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC097637.2-201ENST00000624096 1997 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AL355306.1-201ENST00000415580 579 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC097493.3-201ENST00000509725 367 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 CR383656.12-201ENST00000549567 513 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AL596325.1-201ENST00000563991 1082 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC010336.2-201ENST00000564226 506 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AC084121.4-201ENST00000641598 221 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 AF228730.8-201ENST00000642140 221 ntBASIC12.12□□□□□ -0.47
CSMD3Q7Z407 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD3Q7Z407 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 AC092580.3-201ENST00000430932 139 ntBASIC12.11□□□□□ -0.47
CSMD3Q7Z407 AC243562.1-201ENST00000560672 389 ntBASIC12.11□□□□□ -0.47
CSMD3Q7Z407 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 AP000997.3-201ENST00000623333 2250 ntBASIC12.11□□□□□ -0.47
CSMD3Q7Z407 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD3Q7Z407 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms