Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 DRAXINP1-201ENST00000437611 948 ntBASIC11.68□□□□□ -0.54
SCXQ7RTU7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 AL390719.2-201ENST00000606993 987 ntBASIC11.68□□□□□ -0.54
SCXQ7RTU7 AC068587.9-201ENST00000641814 219 ntBASIC11.68□□□□□ -0.54
SCXQ7RTU7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC11.68□□□□□ -0.54
SCXQ7RTU7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SCXQ7RTU7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 AL845331.1-201ENST00000424978 1190 ntBASIC11.67□□□□□ -0.54
SCXQ7RTU7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 NUS1P1-201ENST00000446295 882 ntBASIC11.67□□□□□ -0.54
SCXQ7RTU7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 AC090616.6-201ENST00000582640 721 ntBASIC11.67□□□□□ -0.54
SCXQ7RTU7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 GPR32P1-201ENST00000601788 811 ntBASIC11.67□□□□□ -0.54
SCXQ7RTU7 IFNL4P1-201ENST00000607083 540 ntBASIC11.67□□□□□ -0.54
SCXQ7RTU7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 Z98044.1-201ENST00000632503 1764 ntBASIC11.67□□□□□ -0.54
SCXQ7RTU7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SCXQ7RTU7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC11.67□□□□□ -0.54
SCXQ7RTU7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.66□□□□□ -0.54
SCXQ7RTU7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC11.66□□□□□ -0.54
SCXQ7RTU7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SCXQ7RTU7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SCXQ7RTU7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC11.66□□□□□ -0.54
SCXQ7RTU7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms