Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COPS6Q7L5N1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COPS6Q7L5N1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.12■■□□□ 1.13
COPS6Q7L5N1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 CRYGEP-201ENST00000412192 528 ntBASIC22.11■■□□□ 1.13
COPS6Q7L5N1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 VN2R19P-201ENST00000442399 1052 ntBASIC22.11■■□□□ 1.13
COPS6Q7L5N1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 AC112482.1-201ENST00000492080 688 ntBASIC22.11■■□□□ 1.13
COPS6Q7L5N1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS6Q7L5N1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 AC012317.2-201ENST00000623305 2251 ntBASIC22.1■■□□□ 1.13
COPS6Q7L5N1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 AC004832.2-201ENST00000426397 482 ntBASIC22.1■■□□□ 1.13
COPS6Q7L5N1 GPX1P2-201ENST00000429271 606 ntBASIC22.1■■□□□ 1.13
COPS6Q7L5N1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 MIR4751-201ENST00000578027 74 ntBASIC22.1■■□□□ 1.13
COPS6Q7L5N1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COPS6Q7L5N1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 HCG4B-203ENST00000450128 991 ntBASIC22.09■■□□□ 1.13
COPS6Q7L5N1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.09■■□□□ 1.13
COPS6Q7L5N1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 AC020763.4-201ENST00000623414 4170 ntBASIC22.09■■□□□ 1.13
COPS6Q7L5N1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COPS6Q7L5N1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 AC006116.8-202ENST00000587620 1550 ntBASIC22.08■■□□□ 1.13
COPS6Q7L5N1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 AL135999.2-201ENST00000622438 1686 ntBASIC22.08■■□□□ 1.13
COPS6Q7L5N1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 PRSS29P-201ENST00000440800 595 ntBASIC22.08■■□□□ 1.13
COPS6Q7L5N1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms