Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNKSR3Q6P9H4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNKSR3Q6P9H4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNKSR3Q6P9H4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNKSR3Q6P9H4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNKSR3Q6P9H4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CNKSR3Q6P9H4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 SLC25A6P2-201ENST00000497974 877 ntBASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 AC135776.1-201ENST00000319817 2481 ntBASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNKSR3Q6P9H4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 AL671277.1-201ENST00000429656 993 ntBASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 AC087163.2-201ENST00000457299 853 ntBASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 RNA5SP421-201ENST00000516864 134 ntBASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 AJ011932.1-201ENST00000621707 465 ntBASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 Z92544.3-201ENST00000624747 417 ntBASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.75■□□□□ 0.59
CNKSR3Q6P9H4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AL020996.1-203ENST00000536896 2307 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AL135999.2-201ENST00000622438 1686 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AC005237.2-201ENST00000434368 219 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AC244107.1-201ENST00000442033 332 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 SPDYE11-202ENST00000450699 704 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 SPDYE9P-201ENST00000570642 692 ntBASIC18.74■□□□□ 0.59
CNKSR3Q6P9H4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms