Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC145285.3-201ENST00000564603 959 ntBASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3F3CQ6NXT2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 BCL2-203ENST00000589955 5011 ntBASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 AL020989.1-201ENST00000422979 469 ntBASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 BX005266.1-201ENST00000473402 457 ntBASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 AC105339.3-201ENST00000560043 636 ntBASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
H3F3CQ6NXT2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3F3CQ6NXT2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms