Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 SPDYE14P-201ENST00000442619 822 ntBASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 AC009118.2-201ENST00000613275 655 ntBASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 MIR6080-201ENST00000617359 66 ntBASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AL645728.2-201ENST00000641974 660 ntBASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PTCRAQ6ISU1 AC129492.6-201ENST00000611383 1305 ntBASIC17.96■□□□□ 0.46
PTCRAQ6ISU1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 ACTG1P4-201ENST00000425123 1122 ntBASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 GPR53P-205ENST00000457298 1084 ntBASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 IGHV3-71-201ENST00000523324 359 ntBASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 AC004233.3-201ENST00000607794 1269 ntBASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 CU639417.3-201ENST00000624240 1404 ntBASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PTCRAQ6ISU1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms