Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 AL049597.2-201ENST00000565575 961 ntBASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 HLA-F-220ENST00000434407 884 ntBASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AL590326.2-201ENST00000625139 305 ntBASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF1Q5TC12 AL391005.1-201ENST00000623953 2435 ntBASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 AL391807.1-203ENST00000604392 2365 ntBASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 KRT18P38-201ENST00000449496 1282 ntBASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 HYMAI.1-201ENST00000620949 238 ntBASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 AC079602.3-201ENST00000623931 403 ntBASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF1Q5TC12 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms