Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD3Q5JTY5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CBWD3Q5JTY5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD3Q5JTY5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD3Q5JTY5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD3Q5JTY5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 AC012615.1-201ENST00000565797 1299 ntBASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD3Q5JTY5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 AL353593.2-201ENST00000602529 1483 ntBASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 AC103564.2-201ENST00000432853 1299 ntBASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 AC104819.1-201ENST00000504587 486 ntBASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CBWD3Q5JTY5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 IGHV3-52-201ENST00000519770 353 ntBASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AC099336.1-202ENST00000602961 463 ntBASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AD001527.2-201ENST00000622994 785 ntBASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBWD3Q5JTY5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 STK25P1-201ENST00000585406 838 ntBASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 AC114341.1-201ENST00000618070 349 ntBASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms