Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AC009336.1-201ENST00000608941 1553 ntBASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AC012317.2-201ENST00000623305 2251 ntBASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 KRT18P67-201ENST00000432816 1264 ntBASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 SART3-203ENST00000546611 1184 ntBASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 AL139327.4-201ENST00000612362 153 ntBASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 NOC2LP2-201ENST00000407594 1944 ntBASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC178Q5BJE1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 AC026396.1-201ENST00000419388 421 ntBASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 TP73-AS1-207ENST00000624167 988 ntBASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC178Q5BJE1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 RNPS1P1-201ENST00000507437 918 ntBASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC178Q5BJE1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms