Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-BQ31612 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HLA-BQ31612 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HLA-BQ31612 BCRP1-201ENST00000444246 691 ntBASIC16.96■□□□□ 0.31
HLA-BQ31612 AL513480.1-201ENST00000451731 511 ntBASIC16.96■□□□□ 0.31
HLA-BQ31612 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.96■□□□□ 0.31
HLA-BQ31612 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-BQ31612 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.96■□□□□ 0.31
HLA-BQ31612 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-BQ31612 AC022145.2-201ENST00000598203 171 ntBASIC16.96■□□□□ 0.31
HLA-BQ31612 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-BQ31612 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 AC135776.1-201ENST00000319817 2481 ntBASIC16.96■□□□□ 0.31
HLA-BQ31612 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-BQ31612 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-BQ31612 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
HLA-BQ31612 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-BQ31612 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
HLA-BQ31612 AC092919.2-201ENST00000623631 1645 ntBASIC16.96■□□□□ 0.3
HLA-BQ31612 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-BQ31612 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-BQ31612 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 AC006116.8-202ENST00000587620 1550 ntBASIC16.95■□□□□ 0.3
HLA-BQ31612 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-BQ31612 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-BQ31612 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-BQ31612 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-BQ31612 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-BQ31612 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-BQ31612 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HLA-BQ31612 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-BQ31612 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-BQ31612 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-BQ31612 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HLA-BQ31612 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 AC023141.5-201ENST00000458585 616 ntBASIC16.94■□□□□ 0.3
HLA-BQ31612 AC112191.1-201ENST00000523689 701 ntBASIC16.94■□□□□ 0.3
HLA-BQ31612 AC109322.1-201ENST00000524499 1264 ntBASIC16.94■□□□□ 0.3
HLA-BQ31612 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-BQ31612 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-BQ31612 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-BQ31612 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-BQ31612 AL020996.1-203ENST00000536896 2307 ntBASIC16.93■□□□□ 0.3
HLA-BQ31612 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-BQ31612 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-BQ31612 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-BQ31612 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-BQ31612 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-BQ31612 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-BQ31612 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-BQ31612 COX20P2-201ENST00000452636 358 ntBASIC16.93■□□□□ 0.3
HLA-BQ31612 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-BQ31612 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms