Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 AC074051.2-201ENST00000565115 352 ntBASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RSPO1Q2MKA7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MINOS1P3-201ENST00000457048 203 ntBASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AP000867.3-201ENST00000524675 377 ntBASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC092329.2-201ENST00000598402 547 ntBASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 AC046185.3-201ENST00000623228 1824 ntBASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO1Q2MKA7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO1Q2MKA7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms