Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AC010336.2-201ENST00000564226 506 ntBASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AL132655.2-201ENST00000596276 594 ntBASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RSPO4Q2I0M5 AL032819.2-201ENST00000624543 2162 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 SPDYE7P-202ENST00000420373 878 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 RN7SL589P-201ENST00000481268 310 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 AC099522.2-201ENST00000607001 744 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 AC116407.2-201ENST00000613639 860 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 AC098818.2-201ENST00000564925 2320 ntBASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO4Q2I0M5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 FAM185BP-201ENST00000443595 716 ntBASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 AC141586.3-201ENST00000562166 1838 ntBASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO4Q2I0M5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 COX5BP2-201ENST00000392354 334 ntBASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO4Q2I0M5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms