Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.67■■□□□ 1.06
DDR1Q08345 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.67■■□□□ 1.06
DDR1Q08345 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 AC063926.2-201ENST00000623766 1308 ntBASIC21.67■■□□□ 1.06
DDR1Q08345 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.67■■□□□ 1.06
DDR1Q08345 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.67■■□□□ 1.06
DDR1Q08345 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.67■■□□□ 1.06
DDR1Q08345 AC005225.4-201ENST00000557330 545 ntBASIC21.67■■□□□ 1.06
DDR1Q08345 AC243562.1-201ENST00000560672 389 ntBASIC21.67■■□□□ 1.06
DDR1Q08345 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.67■■□□□ 1.06
DDR1Q08345 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDR1Q08345 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDR1Q08345 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
DDR1Q08345 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.66■■□□□ 1.06
DDR1Q08345 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 MIR943-201ENST00000401286 94 ntBASIC21.66■■□□□ 1.06
DDR1Q08345 AC140658.5-201ENST00000438532 169 ntBASIC21.66■■□□□ 1.06
DDR1Q08345 TSPY16P-201ENST00000449843 468 ntBASIC21.66■■□□□ 1.06
DDR1Q08345 AC087163.2-201ENST00000457299 853 ntBASIC21.66■■□□□ 1.06
DDR1Q08345 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.66■■□□□ 1.06
DDR1Q08345 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.66■■□□□ 1.06
DDR1Q08345 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
DDR1Q08345 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.66■■□□□ 1.06
DDR1Q08345 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDR1Q08345 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.65■■□□□ 1.06
DDR1Q08345 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.65■■□□□ 1.06
DDR1Q08345 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 CROCCP3-202ENST00000420820 1947 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 TUBB3P1-201ENST00000405796 1332 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 MYCLP1-201ENST00000372451 1075 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 BASP1P1-201ENST00000430708 665 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.65■■□□□ 1.06
DDR1Q08345 TERF1P3-201ENST00000505638 1227 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 AP001059.3-201ENST00000619053 235 ntBASIC21.65■■□□□ 1.06
DDR1Q08345 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDR1Q08345 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDR1Q08345 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDR1Q08345 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDR1Q08345 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDR1Q08345 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDR1Q08345 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DDR1Q08345 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
DDR1Q08345 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDR1Q08345 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
DDR1Q08345 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.64■■□□□ 1.05
DDR1Q08345 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDR1Q08345 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.64■■□□□ 1.05
DDR1Q08345 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDR1Q08345 TFAMP1-201ENST00000412727 736 ntBASIC21.64■■□□□ 1.05
DDR1Q08345 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.64■■□□□ 1.05
DDR1Q08345 KRT18P32-201ENST00000424695 1287 ntBASIC21.64■■□□□ 1.05
DDR1Q08345 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
DDR1Q08345 FAM86C2P-203ENST00000528684 1004 ntBASIC21.64■■□□□ 1.05
DDR1Q08345 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.64■■□□□ 1.05
DDR1Q08345 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDR1Q08345 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
DDR1Q08345 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDR1Q08345 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
DDR1Q08345 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDR1Q08345 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms