Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDH1Q08174 AL049757.1-201ENST00000616842 1596 ntBASIC16.97■□□□□ 0.31
PCDH1Q08174 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH1Q08174 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDH1Q08174 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH1Q08174 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH1Q08174 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH1Q08174 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH1Q08174 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH1Q08174 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH1Q08174 AL445228.2-201ENST00000605589 952 ntBASIC16.96■□□□□ 0.31
PCDH1Q08174 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH1Q08174 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
PCDH1Q08174 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.96■□□□□ 0.31
PCDH1Q08174 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH1Q08174 AP000550.4-202ENST00000639755 178 ntBASIC16.96■□□□□ 0.31
PCDH1Q08174 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PCDH1Q08174 FZD10-202ENST00000539839 3282 ntBASIC16.96■□□□□ 0.31
PCDH1Q08174 AC106820.2-201ENST00000563775 3264 ntBASIC16.96■□□□□ 0.31
PCDH1Q08174 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH1Q08174 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH1Q08174 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH1Q08174 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH1Q08174 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH1Q08174 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH1Q08174 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH1Q08174 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH1Q08174 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PCDH1Q08174 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 CROCCP2-202ENST00000412962 2773 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH1Q08174 IER3-202ENST00000376377 1350 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 AC233702.3-201ENST00000578656 1387 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH1Q08174 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDH1Q08174 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
PCDH1Q08174 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDH1Q08174 VENTXP7-201ENST00000475503 772 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 AC091607.1-201ENST00000490318 1060 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 TPSP2-201ENST00000561760 610 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH1Q08174 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH1Q08174 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDH1Q08174 AP005901.3-202ENST00000581653 237 ntBASIC16.95■□□□□ 0.3
PCDH1Q08174 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDH1Q08174 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH1Q08174 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH1Q08174 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH1Q08174 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 AL353593.2-201ENST00000602529 1483 ntBASIC16.94■□□□□ 0.3
PCDH1Q08174 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDH1Q08174 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms