Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.9□□□□□ -0.02
SSBP1Q04837 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.9□□□□□ -0.02
SSBP1Q04837 AL109923.1-201ENST00000618799 583 ntBASIC14.9□□□□□ -0.02
SSBP1Q04837 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 AC078925.2-201ENST00000624013 1973 ntBASIC14.9□□□□□ -0.02
SSBP1Q04837 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP1Q04837 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP1Q04837 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP1Q04837 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP1Q04837 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP1Q04837 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 KRT8P47-201ENST00000604727 1398 ntBASIC14.89□□□□□ -0.03
SSBP1Q04837 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SSBP1Q04837 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SSBP1Q04837 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 AC097488.1-201ENST00000507834 756 ntBASIC14.89□□□□□ -0.03
SSBP1Q04837 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.89□□□□□ -0.03
SSBP1Q04837 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.89□□□□□ -0.03
SSBP1Q04837 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.89□□□□□ -0.03
SSBP1Q04837 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SSBP1Q04837 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP1Q04837 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 AC093525.9-201ENST00000624961 1746 ntBASIC14.89□□□□□ -0.03
SSBP1Q04837 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP1Q04837 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSBP1Q04837 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.88□□□□□ -0.03
SSBP1Q04837 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 MST1L-201ENST00000442552 2185 ntBASIC14.88□□□□□ -0.03
SSBP1Q04837 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SSBP1Q04837 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.88□□□□□ -0.03
SSBP1Q04837 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SSBP1Q04837 AC116562.2-201ENST00000507042 360 ntBASIC14.88□□□□□ -0.03
SSBP1Q04837 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SSBP1Q04837 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SSBP1Q04837 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.88□□□□□ -0.03
SSBP1Q04837 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP1Q04837 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP1Q04837 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP1Q04837 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP1Q04837 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP1Q04837 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms