Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NKX6-1P78426 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.5■□□□□ 0.07
NKX6-1P78426 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.5■□□□□ 0.07
NKX6-1P78426 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.5■□□□□ 0.07
NKX6-1P78426 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 MTCL1P1-201ENST00000446207 792 ntBASIC15.5■□□□□ 0.07
NKX6-1P78426 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 AC139887.3-201ENST00000568585 713 ntBASIC15.5■□□□□ 0.07
NKX6-1P78426 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.5■□□□□ 0.07
NKX6-1P78426 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.5■□□□□ 0.07
NKX6-1P78426 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NKX6-1P78426 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NKX6-1P78426 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NKX6-1P78426 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX6-1P78426 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX6-1P78426 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 AC243591.1-201ENST00000452967 1364 ntBASIC15.49■□□□□ 0.07
NKX6-1P78426 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.49■□□□□ 0.07
NKX6-1P78426 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.49■□□□□ 0.07
NKX6-1P78426 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.49■□□□□ 0.07
NKX6-1P78426 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.49■□□□□ 0.07
NKX6-1P78426 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NKX6-1P78426 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.49■□□□□ 0.07
NKX6-1P78426 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.49■□□□□ 0.07
NKX6-1P78426 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 AC073648.2-201ENST00000510116 352 ntBASIC15.49■□□□□ 0.07
NKX6-1P78426 AC096582.2-201ENST00000510860 516 ntBASIC15.49■□□□□ 0.07
NKX6-1P78426 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.49■□□□□ 0.07
NKX6-1P78426 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
NKX6-1P78426 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.49■□□□□ 0.07
NKX6-1P78426 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NKX6-1P78426 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NKX6-1P78426 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.48■□□□□ 0.07
NKX6-1P78426 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NKX6-1P78426 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NKX6-1P78426 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms