Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.32■■□□□ 1.32
ZC3H6P61129 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ZC3H6P61129 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC23.31■■□□□ 1.32
ZC3H6P61129 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.31■■□□□ 1.32
ZC3H6P61129 AC015922.1-201ENST00000421102 1152 ntBASIC23.31■■□□□ 1.32
ZC3H6P61129 AC005237.2-201ENST00000434368 219 ntBASIC23.31■■□□□ 1.32
ZC3H6P61129 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.31■■□□□ 1.32
ZC3H6P61129 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.31■■□□□ 1.32
ZC3H6P61129 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.31■■□□□ 1.32
ZC3H6P61129 AC190387.1-201ENST00000551683 408 ntBASIC23.31■■□□□ 1.32
ZC3H6P61129 AC015911.4-201ENST00000588022 1070 ntBASIC23.31■■□□□ 1.32
ZC3H6P61129 AC099522.2-201ENST00000607001 744 ntBASIC23.31■■□□□ 1.32
ZC3H6P61129 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ZC3H6P61129 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.31■■□□□ 1.32
ZC3H6P61129 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H6P61129 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H6P61129 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H6P61129 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H6P61129 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 AL355306.1-201ENST00000415580 579 ntBASIC23.3■■□□□ 1.32
ZC3H6P61129 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H6P61129 AL671277.1-201ENST00000429656 993 ntBASIC23.3■■□□□ 1.32
ZC3H6P61129 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H6P61129 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H6P61129 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H6P61129 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H6P61129 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H6P61129 RNA5SP421-201ENST00000516864 134 ntBASIC23.3■■□□□ 1.32
ZC3H6P61129 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC23.3■■□□□ 1.32
ZC3H6P61129 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.3■■□□□ 1.32
ZC3H6P61129 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H6P61129 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.3■■□□□ 1.32
ZC3H6P61129 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H6P61129 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.3■■□□□ 1.32
ZC3H6P61129 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H6P61129 AC135776.1-201ENST00000319817 2481 ntBASIC23.3■■□□□ 1.32
ZC3H6P61129 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3H6P61129 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ZC3H6P61129 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
ZC3H6P61129 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
ZC3H6P61129 AC002056.1-201ENST00000395613 760 ntBASIC23.29■■□□□ 1.32
ZC3H6P61129 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC23.29■■□□□ 1.32
ZC3H6P61129 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 SLC25A6P2-201ENST00000497974 877 ntBASIC23.29■■□□□ 1.32
ZC3H6P61129 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.29■■□□□ 1.32
ZC3H6P61129 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 AL035252.4-201ENST00000624174 288 ntBASIC23.29■■□□□ 1.32
ZC3H6P61129 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
ZC3H6P61129 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3H6P61129 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H6P61129 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.28■■□□□ 1.32
ZC3H6P61129 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.28■■□□□ 1.32
ZC3H6P61129 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.28■■□□□ 1.32
ZC3H6P61129 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ZC3H6P61129 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
ZC3H6P61129 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC23.28■■□□□ 1.32
ZC3H6P61129 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
ZC3H6P61129 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H6P61129 PMS2P4-201ENST00000412466 1052 ntBASIC23.28■■□□□ 1.32
ZC3H6P61129 INGX-202ENST00000489074 768 ntBASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms