Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.36□□□□□ -0.11
SPCS3P61009 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS3P61009 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS3P61009 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS3P61009 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
SPCS3P61009 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS3P61009 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS3P61009 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS3P61009 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS3P61009 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS3P61009 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS3P61009 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.36□□□□□ -0.11
SPCS3P61009 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPCS3P61009 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.36□□□□□ -0.11
SPCS3P61009 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPCS3P61009 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 PRORSD1P-201ENST00000295112 541 ntBASIC14.35□□□□□ -0.11
SPCS3P61009 AL158047.1-201ENST00000445918 881 ntBASIC14.35□□□□□ -0.11
SPCS3P61009 SEC1P-202ENST00000473944 940 ntBASIC14.35□□□□□ -0.11
SPCS3P61009 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.35□□□□□ -0.11
SPCS3P61009 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
SPCS3P61009 FITM1-202ENST00000559294 800 ntBASIC14.35□□□□□ -0.11
SPCS3P61009 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.35□□□□□ -0.11
SPCS3P61009 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.35□□□□□ -0.11
SPCS3P61009 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.35□□□□□ -0.11
SPCS3P61009 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPCS3P61009 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SPCS3P61009 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.35□□□□□ -0.11
SPCS3P61009 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPCS3P61009 AC022211.2-201ENST00000585075 2527 ntBASIC14.35□□□□□ -0.11
SPCS3P61009 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPCS3P61009 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.34□□□□□ -0.11
SPCS3P61009 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.34□□□□□ -0.11
SPCS3P61009 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.34□□□□□ -0.11
SPCS3P61009 LINC00167-201ENST00000530583 1419 ntBASIC14.34□□□□□ -0.11
SPCS3P61009 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SPCS3P61009 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.34□□□□□ -0.11
SPCS3P61009 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.34□□□□□ -0.11
SPCS3P61009 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.34□□□□□ -0.11
SPCS3P61009 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
SPCS3P61009 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SPCS3P61009 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
SPCS3P61009 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPCS3P61009 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SPCS3P61009 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SPCS3P61009 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPCS3P61009 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms