Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CDC42P60953 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CDC42P60953 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 AL355355.2-201ENST00000442321 338 ntBASIC16.1■□□□□ 0.17
CDC42P60953 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.1■□□□□ 0.17
CDC42P60953 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 AP005242.2-201ENST00000580065 1175 ntBASIC16.1■□□□□ 0.17
CDC42P60953 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.1■□□□□ 0.17
CDC42P60953 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
CDC42P60953 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDC42P60953 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDC42P60953 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDC42P60953 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC42P60953 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC42P60953 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDC42P60953 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDC42P60953 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC42P60953 DOC2GP-204ENST00000639052 2548 ntBASIC16.09■□□□□ 0.17
CDC42P60953 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDC42P60953 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CDC42P60953 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.09■□□□□ 0.17
CDC42P60953 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC42P60953 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.09■□□□□ 0.17
CDC42P60953 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC42P60953 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.09■□□□□ 0.17
CDC42P60953 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.09■□□□□ 0.17
CDC42P60953 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC42P60953 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.09■□□□□ 0.17
CDC42P60953 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC42P60953 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.08■□□□□ 0.17
CDC42P60953 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CDC42P60953 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC42P60953 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC42P60953 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CDC42P60953 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC42P60953 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.08■□□□□ 0.17
CDC42P60953 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.08■□□□□ 0.16
CDC42P60953 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.08■□□□□ 0.16
CDC42P60953 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.08■□□□□ 0.16
CDC42P60953 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC42P60953 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC42P60953 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC42P60953 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms