Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM11AP58511 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMIM11AP58511 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.23■□□□□ 0.19
SMIM11AP58511 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
SMIM11AP58511 TSPY12P-201ENST00000421279 868 ntBASIC16.23■□□□□ 0.19
SMIM11AP58511 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM11AP58511 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM11AP58511 AC112698.1-201ENST00000510299 916 ntBASIC16.23■□□□□ 0.19
SMIM11AP58511 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.23■□□□□ 0.19
SMIM11AP58511 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.23■□□□□ 0.19
SMIM11AP58511 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMIM11AP58511 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM11AP58511 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SMIM11AP58511 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMIM11AP58511 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM11AP58511 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 MMP23A-201ENST00000234610 1017 ntBASIC16.22■□□□□ 0.19
SMIM11AP58511 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.22■□□□□ 0.19
SMIM11AP58511 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 SNORA78-201ENST00000459373 127 ntBASIC16.22■□□□□ 0.19
SMIM11AP58511 ECEL1P2-202ENST00000465689 757 ntBASIC16.22■□□□□ 0.19
SMIM11AP58511 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.22■□□□□ 0.19
SMIM11AP58511 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM11AP58511 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.22■□□□□ 0.19
SMIM11AP58511 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM11AP58511 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SMIM11AP58511 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM11AP58511 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.22■□□□□ 0.19
SMIM11AP58511 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.22■□□□□ 0.19
SMIM11AP58511 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM11AP58511 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM11AP58511 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM11AP58511 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 KRT18P48-201ENST00000434763 852 ntBASIC16.21■□□□□ 0.19
SMIM11AP58511 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SMIM11AP58511 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM11AP58511 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.21■□□□□ 0.19
SMIM11AP58511 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.21■□□□□ 0.19
SMIM11AP58511 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM11AP58511 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.21■□□□□ 0.19
SMIM11AP58511 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMIM11AP58511 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM11AP58511 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.21■□□□□ 0.18
SMIM11AP58511 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SMIM11AP58511 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SMIM11AP58511 AL118508.1-201ENST00000613502 2345 ntBASIC16.2■□□□□ 0.18
SMIM11AP58511 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SMIM11AP58511 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SMIM11AP58511 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SMIM11AP58511 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SMIM11AP58511 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms