Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 KRT17P6-201ENST00000453795 1220 ntBASIC17.13■□□□□ 0.33
AP1S2P56377 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
AP1S2P56377 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S2P56377 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.13■□□□□ 0.33
AP1S2P56377 AC111152.3-201ENST00000569699 673 ntBASIC17.13■□□□□ 0.33
AP1S2P56377 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.13■□□□□ 0.33
AP1S2P56377 NPAP1P7-201ENST00000613027 823 ntBASIC17.13■□□□□ 0.33
AP1S2P56377 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S2P56377 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.13■□□□□ 0.33
AP1S2P56377 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S2P56377 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S2P56377 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S2P56377 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP1S2P56377 SIRPAP1-201ENST00000448467 1770 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
AP1S2P56377 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
AP1S2P56377 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.12■□□□□ 0.33
AP1S2P56377 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.12■□□□□ 0.33
AP1S2P56377 LINC00265-3P-201ENST00000447588 903 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 MINOS1P3-201ENST00000457048 203 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 MIR3180-1-201ENST00000580374 94 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 MIR3180-3-201ENST00000584616 94 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S2P56377 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S2P56377 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.12■□□□□ 0.33
AP1S2P56377 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 AC139713.2-201ENST00000641328 2723 ntBASIC17.12■□□□□ 0.33
AP1S2P56377 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S2P56377 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AP1S2P56377 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AP1S2P56377 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AP1S2P56377 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AP1S2P56377 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AP1S2P56377 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S2P56377 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP1S2P56377 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S2P56377 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
AP1S2P56377 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.11■□□□□ 0.33
AP1S2P56377 AC109462.3-201ENST00000573934 613 ntBASIC17.11■□□□□ 0.33
AP1S2P56377 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
AP1S2P56377 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S2P56377 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AP1S2P56377 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 AL645608.8-201ENST00000606034 2086 ntBASIC17.11■□□□□ 0.33
AP1S2P56377 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 NSUN5P1-202ENST00000421140 1535 ntBASIC17.11■□□□□ 0.33
AP1S2P56377 NSUN5P2-203ENST00000457352 1529 ntBASIC17.11■□□□□ 0.33
AP1S2P56377 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S2P56377 AL049757.1-201ENST00000616842 1596 ntBASIC17.11■□□□□ 0.33
AP1S2P56377 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP1S2P56377 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S2P56377 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S2P56377 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms