Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXG1P55316 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXG1P55316 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXG1P55316 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FOXG1P55316 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FOXG1P55316 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FOXG1P55316 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 SPDYE21P-201ENST00000413323 827 ntBASIC15.4■□□□□ 0.06
FOXG1P55316 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXG1P55316 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXG1P55316 HNRNPDP1-201ENST00000439535 754 ntBASIC15.4■□□□□ 0.06
FOXG1P55316 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
FOXG1P55316 IGHV3-52-201ENST00000519770 353 ntBASIC15.4■□□□□ 0.06
FOXG1P55316 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXG1P55316 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXG1P55316 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXG1P55316 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXG1P55316 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXG1P55316 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXG1P55316 GNAS-203ENST00000306120 1878 ntBASIC15.4■□□□□ 0.06
FOXG1P55316 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXG1P55316 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 RNPS1P1-201ENST00000507437 918 ntBASIC15.39■□□□□ 0.05
FOXG1P55316 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXG1P55316 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXG1P55316 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 AL049840.3-201ENST00000602669 611 ntBASIC15.39■□□□□ 0.05
FOXG1P55316 LINC01451-201ENST00000623792 534 ntBASIC15.39■□□□□ 0.05
FOXG1P55316 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FOXG1P55316 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 HLA-J-201ENST00000462773 1622 ntBASIC15.39■□□□□ 0.05
FOXG1P55316 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXG1P55316 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXG1P55316 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXG1P55316 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXG1P55316 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.38■□□□□ 0.05
FOXG1P55316 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
FOXG1P55316 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
FOXG1P55316 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
FOXG1P55316 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXG1P55316 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXG1P55316 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.38■□□□□ 0.05
FOXG1P55316 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXG1P55316 KLF4P1-201ENST00000412782 1185 ntBASIC15.38■□□□□ 0.05
FOXG1P55316 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.38■□□□□ 0.05
FOXG1P55316 AC018712.1-201ENST00000455767 687 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms