Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDKN2DP55273 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKN2DP55273 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.36■□□□□ 0.37
CDKN2DP55273 BX276092.5-203ENST00000456199 560 ntBASIC17.36■□□□□ 0.37
CDKN2DP55273 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKN2DP55273 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.36■□□□□ 0.37
CDKN2DP55273 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.36■□□□□ 0.37
CDKN2DP55273 AC109462.3-201ENST00000573934 613 ntBASIC17.36■□□□□ 0.37
CDKN2DP55273 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 AP005901.3-202ENST00000581653 237 ntBASIC17.36■□□□□ 0.37
CDKN2DP55273 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKN2DP55273 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDKN2DP55273 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDKN2DP55273 AC116407.4-201ENST00000623319 1061 ntBASIC17.36■□□□□ 0.37
CDKN2DP55273 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDKN2DP55273 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CDKN2DP55273 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDKN2DP55273 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKN2DP55273 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKN2DP55273 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKN2DP55273 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDKN2DP55273 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKN2DP55273 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
CDKN2DP55273 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 CHCHD2P8-201ENST00000429873 447 ntBASIC17.35■□□□□ 0.37
CDKN2DP55273 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.35■□□□□ 0.37
CDKN2DP55273 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 AL121672.3-201ENST00000608644 468 ntBASIC17.35■□□□□ 0.37
CDKN2DP55273 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.35■□□□□ 0.37
CDKN2DP55273 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 AC116353.5-201ENST00000638148 1699 ntBASIC17.35■□□□□ 0.37
CDKN2DP55273 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKN2DP55273 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKN2DP55273 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKN2DP55273 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CDKN2DP55273 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDKN2DP55273 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDKN2DP55273 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDKN2DP55273 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.34■□□□□ 0.37
CDKN2DP55273 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKN2DP55273 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.34■□□□□ 0.37
CDKN2DP55273 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDKN2DP55273 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.34■□□□□ 0.37
CDKN2DP55273 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKN2DP55273 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2DP55273 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms