Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GBX2P52951 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
GBX2P52951 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GBX2P52951 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GBX2P52951 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
GBX2P52951 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.71■□□□□ 0.1
GBX2P52951 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GBX2P52951 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GBX2P52951 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GBX2P52951 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.7■□□□□ 0.1
GBX2P52951 AC103702.1-201ENST00000548801 2630 ntBASIC15.7■□□□□ 0.1
GBX2P52951 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.7■□□□□ 0.1
GBX2P52951 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
GBX2P52951 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
GBX2P52951 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.7■□□□□ 0.1
GBX2P52951 AC007663.1-201ENST00000438948 1240 ntBASIC15.7■□□□□ 0.1
GBX2P52951 UBE2SP1-201ENST00000450587 669 ntBASIC15.7■□□□□ 0.1
GBX2P52951 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.7■□□□□ 0.1
GBX2P52951 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.7■□□□□ 0.1
GBX2P52951 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.7■□□□□ 0.1
GBX2P52951 AC233702.5-201ENST00000584107 538 ntBASIC15.7■□□□□ 0.1
GBX2P52951 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GBX2P52951 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.7■□□□□ 0.1
GBX2P52951 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GBX2P52951 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GBX2P52951 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GBX2P52951 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GBX2P52951 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
GBX2P52951 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.7■□□□□ 0.1
GBX2P52951 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.69■□□□□ 0.1
GBX2P52951 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.69■□□□□ 0.1
GBX2P52951 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 AC142381.4-202ENST00000563973 229 ntBASIC15.69■□□□□ 0.1
GBX2P52951 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 AC024243.1-201ENST00000609234 778 ntBASIC15.69■□□□□ 0.1
GBX2P52951 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.69■□□□□ 0.1
GBX2P52951 ITM2C-210ENST00000620962 501 ntBASIC15.69■□□□□ 0.1
GBX2P52951 AC010653.2-201ENST00000623505 997 ntBASIC15.69■□□□□ 0.1
GBX2P52951 AC092865.7-201ENST00000641832 219 ntBASIC15.69■□□□□ 0.1
GBX2P52951 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.69■□□□□ 0.1
GBX2P52951 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GBX2P52951 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
GBX2P52951 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
GBX2P52951 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 AP003071.4-201ENST00000562276 1284 ntBASIC15.68■□□□□ 0.1
GBX2P52951 C2orf69P3-201ENST00000565542 1120 ntBASIC15.68■□□□□ 0.1
GBX2P52951 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GBX2P52951 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GBX2P52951 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GBX2P52951 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms