Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGA2P52926 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.05■□□□□ 0.16
HMGA2P52926 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGA2P52926 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HMGA2P52926 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 IGHGP-201ENST00000390555 1178 ntBASIC16.05■□□□□ 0.16
HMGA2P52926 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HMGA2P52926 AC124947.2-201ENST00000547118 1133 ntBASIC16.05■□□□□ 0.16
HMGA2P52926 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGA2P52926 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGA2P52926 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.05■□□□□ 0.16
HMGA2P52926 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
HMGA2P52926 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.05■□□□□ 0.16
HMGA2P52926 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HMGA2P52926 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGA2P52926 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HMGA2P52926 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HMGA2P52926 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGA2P52926 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGA2P52926 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HMGA2P52926 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 MIR4497-201ENST00000583208 89 ntBASIC16.04■□□□□ 0.16
HMGA2P52926 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.04■□□□□ 0.16
HMGA2P52926 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGA2P52926 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGA2P52926 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HMGA2P52926 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HMGA2P52926 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGA2P52926 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGA2P52926 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGA2P52926 MYCLP1-201ENST00000372451 1075 ntBASIC16.03■□□□□ 0.16
HMGA2P52926 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.03■□□□□ 0.16
HMGA2P52926 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 AL031432.5-201ENST00000641059 760 ntBASIC16.03■□□□□ 0.16
HMGA2P52926 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGA2P52926 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGA2P52926 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms