Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCN3P51790 AC108751.1-201ENST00000490852 363 ntBASIC19.28■□□□□ 0.68
CLCN3P51790 PGAM5P1-201ENST00000518923 814 ntBASIC19.28■□□□□ 0.68
CLCN3P51790 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.28■□□□□ 0.68
CLCN3P51790 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 AC006538.3-201ENST00000612495 578 ntBASIC19.28■□□□□ 0.68
CLCN3P51790 FAM197Y3-203ENST00000618346 717 ntBASIC19.28■□□□□ 0.68
CLCN3P51790 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 AC012317.2-201ENST00000623305 2251 ntBASIC19.28■□□□□ 0.68
CLCN3P51790 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 NEFHP1-201ENST00000412845 2629 ntBASIC19.28■□□□□ 0.68
CLCN3P51790 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CLCN3P51790 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCN3P51790 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CLCN3P51790 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCN3P51790 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 MYCLP1-201ENST00000372451 1075 ntBASIC19.27■□□□□ 0.68
CLCN3P51790 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCN3P51790 KRT18P13-201ENST00000400056 1290 ntBASIC19.27■□□□□ 0.68
CLCN3P51790 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CLCN3P51790 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 AC092865.5-201ENST00000545435 363 ntBASIC19.27■□□□□ 0.68
CLCN3P51790 AL139424.1-201ENST00000607572 797 ntBASIC19.27■□□□□ 0.68
CLCN3P51790 GPALPP1-207ENST00000611650 899 ntBASIC19.27■□□□□ 0.68
CLCN3P51790 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CLCN3P51790 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
CLCN3P51790 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCN3P51790 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN3P51790 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CLCN3P51790 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN3P51790 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CLCN3P51790 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN3P51790 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN3P51790 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN3P51790 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN3P51790 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.27■□□□□ 0.67
CLCN3P51790 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CLCN3P51790 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN3P51790 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN3P51790 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN3P51790 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN3P51790 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN3P51790 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN3P51790 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN3P51790 KRT18P3-201ENST00000451602 1288 ntBASIC19.26■□□□□ 0.67
CLCN3P51790 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.26■□□□□ 0.67
CLCN3P51790 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCN3P51790 PGM5P2-202ENST00000637225 1043 ntBASIC19.26■□□□□ 0.67
CLCN3P51790 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLCN3P51790 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN3P51790 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN3P51790 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CLCN3P51790 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN3P51790 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN3P51790 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN3P51790 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 AL591424.1-201ENST00000442569 1213 ntBASIC19.25■□□□□ 0.67
CLCN3P51790 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CLCN3P51790 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCN3P51790 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN3P51790 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms