Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 LAGE3P1-201ENST00000425356 484 ntBASIC16.13■□□□□ 0.17
SSR4P51571 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR4P51571 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.13■□□□□ 0.17
SSR4P51571 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR4P51571 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR4P51571 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR4P51571 AC107918.4-202ENST00000641623 219 ntBASIC16.13■□□□□ 0.17
SSR4P51571 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR4P51571 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR4P51571 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR4P51571 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR4P51571 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSR4P51571 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR4P51571 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR4P51571 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 AC004817.3-201ENST00000602957 2129 ntBASIC16.12■□□□□ 0.17
SSR4P51571 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 AC005104.2-201ENST00000427818 678 ntBASIC16.12■□□□□ 0.17
SSR4P51571 SLC25A6P5-201ENST00000435663 894 ntBASIC16.12■□□□□ 0.17
SSR4P51571 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.12■□□□□ 0.17
SSR4P51571 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR4P51571 AL049840.3-201ENST00000602669 611 ntBASIC16.12■□□□□ 0.17
SSR4P51571 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR4P51571 AL390961.4-201ENST00000623958 2535 ntBASIC16.12■□□□□ 0.17
SSR4P51571 IL9RP2-201ENST00000423948 1312 ntBASIC16.12■□□□□ 0.17
SSR4P51571 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR4P51571 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SSR4P51571 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR4P51571 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR4P51571 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR4P51571 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR4P51571 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR4P51571 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR4P51571 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR4P51571 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR4P51571 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR4P51571 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SSR4P51571 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR4P51571 AC008735.5-201ENST00000623544 497 ntBASIC16.11■□□□□ 0.17
SSR4P51571 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SSR4P51571 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR4P51571 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR4P51571 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR4P51571 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SSR4P51571 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR4P51571 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR4P51571 AC243591.1-201ENST00000452967 1364 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms