Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB5CP51148 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
RAB5CP51148 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB5CP51148 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB5CP51148 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5CP51148 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5CP51148 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5CP51148 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB5CP51148 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB5CP51148 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB5CP51148 AC005837.3-201ENST00000612163 286 ntBASIC14.15□□□□□ -0.14
RAB5CP51148 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5CP51148 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5CP51148 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RAB5CP51148 AC100803.2-201ENST00000562459 1963 ntBASIC14.14□□□□□ -0.15
RAB5CP51148 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB5CP51148 AC137761.2-201ENST00000561729 223 ntBASIC14.14□□□□□ -0.15
RAB5CP51148 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 AC145350.3-201ENST00000569033 163 ntBASIC14.14□□□□□ -0.15
RAB5CP51148 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 AC120498.8-201ENST00000614275 531 ntBASIC14.14□□□□□ -0.15
RAB5CP51148 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms