Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.66■□□□□ 0.74
CENPFP49454 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.66■□□□□ 0.74
CENPFP49454 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
CENPFP49454 GMCL1P1-201ENST00000463439 1581 ntBASIC19.66■□□□□ 0.74
CENPFP49454 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
CENPFP49454 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CENPFP49454 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.66■□□□□ 0.74
CENPFP49454 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CENPFP49454 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.66■□□□□ 0.74
CENPFP49454 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.66■□□□□ 0.74
CENPFP49454 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.66■□□□□ 0.74
CENPFP49454 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CENPFP49454 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.66■□□□□ 0.74
CENPFP49454 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CENPFP49454 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CENPFP49454 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.65■□□□□ 0.74
CENPFP49454 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.65■□□□□ 0.74
CENPFP49454 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.65■□□□□ 0.74
CENPFP49454 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.65■□□□□ 0.74
CENPFP49454 AC116407.2-201ENST00000613639 860 ntBASIC19.65■□□□□ 0.74
CENPFP49454 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
CENPFP49454 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.65■□□□□ 0.74
CENPFP49454 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.65■□□□□ 0.74
CENPFP49454 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.65■□□□□ 0.74
CENPFP49454 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.65■□□□□ 0.74
CENPFP49454 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CENPFP49454 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.64■□□□□ 0.74
CENPFP49454 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CENPFP49454 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.64■□□□□ 0.74
CENPFP49454 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CENPFP49454 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CENPFP49454 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.64■□□□□ 0.74
CENPFP49454 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.64■□□□□ 0.74
CENPFP49454 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.64■□□□□ 0.74
CENPFP49454 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.64■□□□□ 0.73
CENPFP49454 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 IGHV3-72-202ENST00000621503 303 ntBASIC19.64■□□□□ 0.73
CENPFP49454 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.64■□□□□ 0.73
CENPFP49454 PI4KAP1-204ENST00000612579 1703 ntBASIC19.64■□□□□ 0.73
CENPFP49454 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CENPFP49454 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.64■□□□□ 0.73
CENPFP49454 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.64■□□□□ 0.73
CENPFP49454 CU639417.3-201ENST00000624240 1404 ntBASIC19.64■□□□□ 0.73
CENPFP49454 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 RPS2P32-201ENST00000439199 892 ntBASIC19.63■□□□□ 0.73
CENPFP49454 SPTLC1P1-201ENST00000447199 261 ntBASIC19.63■□□□□ 0.73
CENPFP49454 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.63■□□□□ 0.73
CENPFP49454 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.63■□□□□ 0.73
CENPFP49454 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CENPFP49454 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.63■□□□□ 0.73
CENPFP49454 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CENPFP49454 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.63■□□□□ 0.73
CENPFP49454 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.63■□□□□ 0.73
CENPFP49454 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.63■□□□□ 0.73
CENPFP49454 AP000997.3-201ENST00000623333 2250 ntBASIC19.63■□□□□ 0.73
CENPFP49454 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.63■□□□□ 0.73
CENPFP49454 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CENPFP49454 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.63■□□□□ 0.73
CENPFP49454 AC140658.5-201ENST00000438532 169 ntBASIC19.63■□□□□ 0.73
CENPFP49454 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.63■□□□□ 0.73
CENPFP49454 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms