Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.71■□□□□ 0.27
RORAP35398 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
RORAP35398 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RORAP35398 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
RORAP35398 RPL13AP23-201ENST00000480739 586 ntBASIC16.71■□□□□ 0.27
RORAP35398 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.71■□□□□ 0.27
RORAP35398 IGHV3-22-201ENST00000520721 359 ntBASIC16.71■□□□□ 0.27
RORAP35398 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.71■□□□□ 0.27
RORAP35398 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.71■□□□□ 0.27
RORAP35398 AC012640.2-201ENST00000561606 901 ntBASIC16.71■□□□□ 0.27
RORAP35398 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.71■□□□□ 0.27
RORAP35398 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.71■□□□□ 0.27
RORAP35398 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.71■□□□□ 0.27
RORAP35398 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.71■□□□□ 0.27
RORAP35398 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 AC107918.4-202ENST00000641623 219 ntBASIC16.71■□□□□ 0.27
RORAP35398 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RORAP35398 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RORAP35398 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RORAP35398 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RORAP35398 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RORAP35398 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 SIGLEC16-201ENST00000599858 1437 ntBASIC16.7■□□□□ 0.26
RORAP35398 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.7■□□□□ 0.26
RORAP35398 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 HLA-J-201ENST00000462773 1622 ntBASIC16.7■□□□□ 0.26
RORAP35398 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.7■□□□□ 0.26
RORAP35398 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.7■□□□□ 0.26
RORAP35398 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.7■□□□□ 0.26
RORAP35398 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.7■□□□□ 0.26
RORAP35398 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 AC008735.5-201ENST00000623544 497 ntBASIC16.7■□□□□ 0.26
RORAP35398 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.7■□□□□ 0.26
RORAP35398 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RORAP35398 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.7■□□□□ 0.26
RORAP35398 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
RORAP35398 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.69■□□□□ 0.26
RORAP35398 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RORAP35398 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RORAP35398 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 SPDYE21P-201ENST00000413323 827 ntBASIC16.69■□□□□ 0.26
RORAP35398 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.69■□□□□ 0.26
RORAP35398 BX005266.1-201ENST00000473402 457 ntBASIC16.69■□□□□ 0.26
RORAP35398 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.69■□□□□ 0.26
RORAP35398 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.69■□□□□ 0.26
RORAP35398 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 AL022326.1-202ENST00000641533 845 ntBASIC16.69■□□□□ 0.26
RORAP35398 AP000997.3-201ENST00000623333 2250 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms