Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHMP24386 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP24386 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.47■□□□□ 0.23
CHMP24386 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP24386 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP24386 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP24386 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP24386 AC005332.3-201ENST00000589904 676 ntBASIC16.47■□□□□ 0.23
CHMP24386 AL390719.2-201ENST00000606993 987 ntBASIC16.47■□□□□ 0.23
CHMP24386 AC093458.2-201ENST00000623150 629 ntBASIC16.47■□□□□ 0.23
CHMP24386 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 Z83836.1-201ENST00000624605 1642 ntBASIC16.47■□□□□ 0.23
CHMP24386 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHMP24386 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP24386 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP24386 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP24386 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 AC133963.1-201ENST00000504166 1679 ntBASIC16.46■□□□□ 0.23
CHMP24386 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP24386 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP24386 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHMP24386 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP24386 ATP5G2P1-201ENST00000433580 426 ntBASIC16.46■□□□□ 0.23
CHMP24386 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 TSSC2-201ENST00000450217 709 ntBASIC16.46■□□□□ 0.23
CHMP24386 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CHMP24386 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP24386 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 AC016734.2-201ENST00000624325 1377 ntBASIC16.46■□□□□ 0.23
CHMP24386 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHMP24386 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP24386 CROCCP2-202ENST00000412962 2773 ntBASIC16.46■□□□□ 0.23
CHMP24386 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP24386 AL024508.2-201ENST00000607749 1894 ntBASIC16.46■□□□□ 0.22
CHMP24386 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP24386 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP24386 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP24386 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.46■□□□□ 0.22
CHMP24386 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 PKD1P1-201ENST00000458669 6805 ntBASIC16.45■□□□□ 0.22
CHMP24386 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHMP24386 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP24386 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CHMP24386 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP24386 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CHMP24386 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CHMP24386 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP24386 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHMP24386 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 CHCHD2P8-201ENST00000429873 447 ntBASIC16.45■□□□□ 0.22
CHMP24386 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.45■□□□□ 0.22
CHMP24386 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP24386 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP24386 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.45■□□□□ 0.22
CHMP24386 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP24386 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHMP24386 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP24386 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms