Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHBP21953 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BCKDHBP21953 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BCKDHBP21953 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.28■□□□□ 0.36
BCKDHBP21953 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BCKDHBP21953 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
BCKDHBP21953 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.27■□□□□ 0.36
BCKDHBP21953 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
BCKDHBP21953 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.27■□□□□ 0.36
BCKDHBP21953 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
BCKDHBP21953 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 COX20P2-201ENST00000452636 358 ntBASIC17.27■□□□□ 0.36
BCKDHBP21953 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.27■□□□□ 0.36
BCKDHBP21953 HLA-J-203ENST00000494367 1087 ntBASIC17.27■□□□□ 0.36
BCKDHBP21953 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.27■□□□□ 0.36
BCKDHBP21953 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BCKDHBP21953 REXO1L3P-201ENST00000622202 1288 ntBASIC17.27■□□□□ 0.36
BCKDHBP21953 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.27■□□□□ 0.36
BCKDHBP21953 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BCKDHBP21953 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BCKDHBP21953 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BCKDHBP21953 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BCKDHBP21953 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
BCKDHBP21953 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.27■□□□□ 0.35
BCKDHBP21953 AC093677.2-201ENST00000600169 1863 ntBASIC17.27■□□□□ 0.35
BCKDHBP21953 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.26■□□□□ 0.35
BCKDHBP21953 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 AL590787.1-201ENST00000568856 1315 ntBASIC17.26■□□□□ 0.35
BCKDHBP21953 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.26■□□□□ 0.35
BCKDHBP21953 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.26■□□□□ 0.35
BCKDHBP21953 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.26■□□□□ 0.35
BCKDHBP21953 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.26■□□□□ 0.35
BCKDHBP21953 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.26■□□□□ 0.35
BCKDHBP21953 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.26■□□□□ 0.35
BCKDHBP21953 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.26■□□□□ 0.35
BCKDHBP21953 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.26■□□□□ 0.35
BCKDHBP21953 AC023141.5-201ENST00000458585 616 ntBASIC17.26■□□□□ 0.35
BCKDHBP21953 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.26■□□□□ 0.35
BCKDHBP21953 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
BCKDHBP21953 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.26■□□□□ 0.35
BCKDHBP21953 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.26■□□□□ 0.35
BCKDHBP21953 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BCKDHBP21953 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BCKDHBP21953 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
BCKDHBP21953 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BCKDHBP21953 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
BCKDHBP21953 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.25■□□□□ 0.35
BCKDHBP21953 AC002558.1-201ENST00000488906 803 ntBASIC17.25■□□□□ 0.35
BCKDHBP21953 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.25■□□□□ 0.35
BCKDHBP21953 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
BCKDHBP21953 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.25■□□□□ 0.35
BCKDHBP21953 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 LINC00628-201ENST00000628516 1289 ntBASIC17.25■□□□□ 0.35
BCKDHBP21953 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
BCKDHBP21953 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.25■□□□□ 0.35
BCKDHBP21953 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BCKDHBP21953 AL121761.2-201ENST00000598007 1648 ntBASIC17.25■□□□□ 0.35
BCKDHBP21953 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BCKDHBP21953 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.24■□□□□ 0.35
BCKDHBP21953 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BCKDHBP21953 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms