Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
XRCC1P18887 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.56■□□□□ 0.4
XRCC1P18887 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.56■□□□□ 0.4
XRCC1P18887 MTCL1P1-201ENST00000446207 792 ntBASIC17.56■□□□□ 0.4
XRCC1P18887 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.56■□□□□ 0.4
XRCC1P18887 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.56■□□□□ 0.4
XRCC1P18887 AC111152.3-201ENST00000569699 673 ntBASIC17.56■□□□□ 0.4
XRCC1P18887 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
XRCC1P18887 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.56■□□□□ 0.4
XRCC1P18887 AC006116.8-202ENST00000587620 1550 ntBASIC17.56■□□□□ 0.4
XRCC1P18887 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
XRCC1P18887 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
XRCC1P18887 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.56■□□□□ 0.4
XRCC1P18887 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
XRCC1P18887 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC1P18887 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
XRCC1P18887 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.55■□□□□ 0.4
XRCC1P18887 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.55■□□□□ 0.4
XRCC1P18887 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
XRCC1P18887 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
XRCC1P18887 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
XRCC1P18887 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.55■□□□□ 0.4
XRCC1P18887 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.55■□□□□ 0.4
XRCC1P18887 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.55■□□□□ 0.4
XRCC1P18887 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.55■□□□□ 0.4
XRCC1P18887 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.55■□□□□ 0.4
XRCC1P18887 AC091304.2-201ENST00000564639 760 ntBASIC17.55■□□□□ 0.4
XRCC1P18887 AC099336.1-202ENST00000602961 463 ntBASIC17.55■□□□□ 0.4
XRCC1P18887 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.55■□□□□ 0.4
XRCC1P18887 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
XRCC1P18887 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
XRCC1P18887 NKILA-202ENST00000614771 2598 ntBASIC17.55■□□□□ 0.4
XRCC1P18887 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
XRCC1P18887 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC1P18887 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 AC011676.5-201ENST00000624864 2660 ntBASIC17.54■□□□□ 0.4
XRCC1P18887 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 POM121L3P-201ENST00000419331 1163 ntBASIC17.54■□□□□ 0.4
XRCC1P18887 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.54■□□□□ 0.4
XRCC1P18887 MINOS1P3-201ENST00000457048 203 ntBASIC17.54■□□□□ 0.4
XRCC1P18887 KRT18P31-201ENST00000506277 1292 ntBASIC17.54■□□□□ 0.4
XRCC1P18887 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
XRCC1P18887 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
XRCC1P18887 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
XRCC1P18887 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.54■□□□□ 0.4
XRCC1P18887 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms