Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.71■□□□□ 0.43
VCLP18206 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VCLP18206 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 AC246785.2-201ENST00000432512 513 ntBASIC17.71■□□□□ 0.43
VCLP18206 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 TOB2P1-201ENST00000469761 992 ntBASIC17.71■□□□□ 0.43
VCLP18206 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 TPSP2-201ENST00000561760 610 ntBASIC17.71■□□□□ 0.43
VCLP18206 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.71■□□□□ 0.43
VCLP18206 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.71■□□□□ 0.43
VCLP18206 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.71■□□□□ 0.43
VCLP18206 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
VCLP18206 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.71■□□□□ 0.43
VCLP18206 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
VCLP18206 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.71■□□□□ 0.43
VCLP18206 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCLP18206 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.71■□□□□ 0.42
VCLP18206 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
VCLP18206 AC022898.2-201ENST00000616822 1312 ntBASIC17.71■□□□□ 0.42
VCLP18206 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.71■□□□□ 0.42
VCLP18206 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VCLP18206 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.7■□□□□ 0.42
VCLP18206 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.7■□□□□ 0.42
VCLP18206 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.7■□□□□ 0.42
VCLP18206 AP000867.3-201ENST00000524675 377 ntBASIC17.7■□□□□ 0.42
VCLP18206 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VCLP18206 MIR3180-1-201ENST00000580374 94 ntBASIC17.7■□□□□ 0.42
VCLP18206 MIR3180-3-201ENST00000584616 94 ntBASIC17.7■□□□□ 0.42
VCLP18206 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.7■□□□□ 0.42
VCLP18206 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.7■□□□□ 0.42
VCLP18206 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.7■□□□□ 0.42
VCLP18206 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
VCLP18206 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCLP18206 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VCLP18206 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VCLP18206 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.69■□□□□ 0.42
VCLP18206 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.69■□□□□ 0.42
VCLP18206 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VCLP18206 AC018695.7-201ENST00000624587 2492 ntBASIC17.69■□□□□ 0.42
VCLP18206 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
VCLP18206 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCLP18206 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.69■□□□□ 0.42
VCLP18206 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms