Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMPD1P17405 REXO1L11P-201ENST00000620964 1927 ntBASIC19.45■□□□□ 0.7
SMPD1P17405 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMPD1P17405 AC090164.3-201ENST00000610780 2143 ntBASIC19.45■□□□□ 0.7
SMPD1P17405 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.44■□□□□ 0.7
SMPD1P17405 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 ACTG1P14-201ENST00000446382 1122 ntBASIC19.44■□□□□ 0.7
SMPD1P17405 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.44■□□□□ 0.7
SMPD1P17405 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.44■□□□□ 0.7
SMPD1P17405 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMPD1P17405 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
SMPD1P17405 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SMPD1P17405 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMPD1P17405 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.43■□□□□ 0.7
SMPD1P17405 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.43■□□□□ 0.7
SMPD1P17405 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMPD1P17405 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
SMPD1P17405 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMPD1P17405 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.43■□□□□ 0.7
SMPD1P17405 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.43■□□□□ 0.7
SMPD1P17405 FAM185BP-201ENST00000443595 716 ntBASIC19.43■□□□□ 0.7
SMPD1P17405 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SMPD1P17405 AC046185.3-201ENST00000623228 1824 ntBASIC19.43■□□□□ 0.7
SMPD1P17405 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.43■□□□□ 0.7
SMPD1P17405 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.43■□□□□ 0.7
SMPD1P17405 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMPD1P17405 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMPD1P17405 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.42■□□□□ 0.7
SMPD1P17405 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.42■□□□□ 0.7
SMPD1P17405 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMPD1P17405 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
SMPD1P17405 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SMPD1P17405 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.42■□□□□ 0.7
SMPD1P17405 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.42■□□□□ 0.7
SMPD1P17405 AP000344.2-201ENST00000512987 629 ntBASIC19.42■□□□□ 0.7
SMPD1P17405 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.42■□□□□ 0.7
SMPD1P17405 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
SMPD1P17405 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMPD1P17405 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.42■□□□□ 0.7
SMPD1P17405 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SMPD1P17405 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
SMPD1P17405 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.42■□□□□ 0.7
SMPD1P17405 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMPD1P17405 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
SMPD1P17405 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SMPD1P17405 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD1P17405 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SMPD1P17405 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD1P17405 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms