Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 IER3-202ENST00000376377 1350 ntBASIC16.31■□□□□ 0.2
UBL4AP11441 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4AP11441 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBL4AP11441 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 PCED1CP-201ENST00000419887 785 ntBASIC16.31■□□□□ 0.2
UBL4AP11441 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4AP11441 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 KRT18P35-201ENST00000510488 1269 ntBASIC16.31■□□□□ 0.2
UBL4AP11441 AC124864.1-201ENST00000623408 392 ntBASIC16.31■□□□□ 0.2
UBL4AP11441 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4AP11441 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.31■□□□□ 0.2
UBL4AP11441 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.31■□□□□ 0.2
UBL4AP11441 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBL4AP11441 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBL4AP11441 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 LINC00896-202ENST00000609602 2128 ntBASIC16.3■□□□□ 0.2
UBL4AP11441 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4AP11441 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBL4AP11441 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.3■□□□□ 0.2
UBL4AP11441 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.3■□□□□ 0.2
UBL4AP11441 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
UBL4AP11441 RN7SL606P-201ENST00000472779 293 ntBASIC16.3■□□□□ 0.2
UBL4AP11441 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.3■□□□□ 0.2
UBL4AP11441 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.3■□□□□ 0.2
UBL4AP11441 AC116407.4-201ENST00000623319 1061 ntBASIC16.3■□□□□ 0.2
UBL4AP11441 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4AP11441 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.3■□□□□ 0.2
UBL4AP11441 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
UBL4AP11441 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBL4AP11441 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.3■□□□□ 0.2
UBL4AP11441 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBL4AP11441 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.3■□□□□ 0.2
UBL4AP11441 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBL4AP11441 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBL4AP11441 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
UBL4AP11441 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 MIR1224-201ENST00000408193 85 ntBASIC16.29■□□□□ 0.2
UBL4AP11441 CHCHD2P8-201ENST00000429873 447 ntBASIC16.29■□□□□ 0.2
UBL4AP11441 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.29■□□□□ 0.2
UBL4AP11441 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.29■□□□□ 0.2
UBL4AP11441 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 AC010331.1-201ENST00000611423 582 ntBASIC16.29■□□□□ 0.2
UBL4AP11441 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.29■□□□□ 0.2
UBL4AP11441 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBL4AP11441 AL355312.1-201ENST00000407115 2176 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms