Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CD28P10747 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.75□□□□□ -0.21
CD28P10747 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.75□□□□□ -0.21
CD28P10747 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CD28P10747 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.75□□□□□ -0.21
CD28P10747 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
CD28P10747 AC073592.5-201ENST00000624854 528 ntBASIC13.75□□□□□ -0.21
CD28P10747 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.75□□□□□ -0.21
CD28P10747 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.75□□□□□ -0.21
CD28P10747 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.75□□□□□ -0.21
CD28P10747 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.74□□□□□ -0.21
CD28P10747 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 FER1L4-210ENST00000615531 5998 ntBASIC13.74□□□□□ -0.21
CD28P10747 WIZP1-201ENST00000531444 2299 ntBASIC13.74□□□□□ -0.21
CD28P10747 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.74□□□□□ -0.21
CD28P10747 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CD28P10747 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 COX5BP2-201ENST00000392354 334 ntBASIC13.74□□□□□ -0.21
CD28P10747 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.74□□□□□ -0.21
CD28P10747 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.74□□□□□ -0.21
CD28P10747 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.74□□□□□ -0.21
CD28P10747 AC103564.2-201ENST00000432853 1299 ntBASIC13.74□□□□□ -0.21
CD28P10747 UNC93B6-202ENST00000528242 690 ntBASIC13.74□□□□□ -0.21
CD28P10747 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
CD28P10747 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.74□□□□□ -0.21
CD28P10747 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.74□□□□□ -0.21
CD28P10747 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.74□□□□□ -0.21
CD28P10747 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.74□□□□□ -0.21
CD28P10747 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CD28P10747 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.74□□□□□ -0.21
CD28P10747 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD28P10747 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD28P10747 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.73□□□□□ -0.21
CD28P10747 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CD28P10747 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.73□□□□□ -0.21
CD28P10747 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.73□□□□□ -0.21
CD28P10747 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.73□□□□□ -0.21
CD28P10747 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.73□□□□□ -0.21
CD28P10747 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CD28P10747 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CD28P10747 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD28P10747 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms