Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.96□□□□□ -0.17
PF4V1P10720 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PF4V1P10720 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.96□□□□□ -0.17
PF4V1P10720 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PF4V1P10720 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.96□□□□□ -0.17
PF4V1P10720 AC093909.1-201ENST00000504731 1122 ntBASIC13.96□□□□□ -0.17
PF4V1P10720 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.96□□□□□ -0.17
PF4V1P10720 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.96□□□□□ -0.17
PF4V1P10720 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 SLC25A6P4-201ENST00000586535 553 ntBASIC13.96□□□□□ -0.17
PF4V1P10720 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 AC120114.3-201ENST00000611923 658 ntBASIC13.96□□□□□ -0.17
PF4V1P10720 AC114341.1-201ENST00000618070 349 ntBASIC13.96□□□□□ -0.17
PF4V1P10720 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PF4V1P10720 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.96□□□□□ -0.17
PF4V1P10720 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.96□□□□□ -0.17
PF4V1P10720 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PF4V1P10720 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PF4V1P10720 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
PF4V1P10720 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PF4V1P10720 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
PF4V1P10720 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
PF4V1P10720 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PF4V1P10720 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PF4V1P10720 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.95□□□□□ -0.18
PF4V1P10720 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 AF186996.4-201ENST00000467186 377 ntBASIC13.95□□□□□ -0.18
PF4V1P10720 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.95□□□□□ -0.18
PF4V1P10720 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 AC106795.1-205ENST00000512851 1056 ntBASIC13.95□□□□□ -0.18
PF4V1P10720 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.95□□□□□ -0.18
PF4V1P10720 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.95□□□□□ -0.18
PF4V1P10720 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.95□□□□□ -0.18
PF4V1P10720 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PF4V1P10720 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.95□□□□□ -0.18
PF4V1P10720 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PF4V1P10720 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PF4V1P10720 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PF4V1P10720 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.94□□□□□ -0.18
PF4V1P10720 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.94□□□□□ -0.18
PF4V1P10720 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms