Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.12■□□□□ 0.97
APPP05067 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
APPP05067 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APPP05067 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPP05067 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPP05067 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
APPP05067 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPP05067 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
APPP05067 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPP05067 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
APPP05067 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APPP05067 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.12■□□□□ 0.97
APPP05067 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.11■□□□□ 0.97
APPP05067 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.11■□□□□ 0.97
APPP05067 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.11■□□□□ 0.97
APPP05067 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.11■□□□□ 0.97
APPP05067 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.11■□□□□ 0.97
APPP05067 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.11■□□□□ 0.97
APPP05067 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.11■□□□□ 0.97
APPP05067 AKR1C7P-201ENST00000305623 895 ntBASIC21.11■□□□□ 0.97
APPP05067 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.11■□□□□ 0.97
APPP05067 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 SAPCD2P3-201ENST00000455031 850 ntBASIC21.11■□□□□ 0.97
APPP05067 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.11■□□□□ 0.97
APPP05067 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.11■□□□□ 0.97
APPP05067 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.11■□□□□ 0.97
APPP05067 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.11■□□□□ 0.97
APPP05067 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APPP05067 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
APPP05067 FZD10-202ENST00000539839 3282 ntBASIC21.11■□□□□ 0.97
APPP05067 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
APPP05067 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
APPP05067 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.11■□□□□ 0.97
APPP05067 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.11■□□□□ 0.97
APPP05067 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
APPP05067 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.1■□□□□ 0.97
APPP05067 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.1■□□□□ 0.97
APPP05067 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.1■□□□□ 0.97
APPP05067 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
APPP05067 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.1■□□□□ 0.97
APPP05067 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
APPP05067 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
APPP05067 AC103564.2-201ENST00000432853 1299 ntBASIC21.1■□□□□ 0.97
APPP05067 SLC25A6P5-201ENST00000435663 894 ntBASIC21.1■□□□□ 0.97
APPP05067 ABCD1P5-201ENST00000445663 754 ntBASIC21.1■□□□□ 0.97
APPP05067 AF238378.1-201ENST00000526806 358 ntBASIC21.1■□□□□ 0.97
APPP05067 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
APPP05067 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.1■□□□□ 0.97
APPP05067 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 AP001269.4-201ENST00000609611 512 ntBASIC21.1■□□□□ 0.97
APPP05067 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.1■□□□□ 0.97
APPP05067 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
APPP05067 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APPP05067 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
APPP05067 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.1■□□□□ 0.97
APPP05067 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
APPP05067 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.09■□□□□ 0.97
APPP05067 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
APPP05067 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.09■□□□□ 0.97
APPP05067 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.09■□□□□ 0.97
APPP05067 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.09■□□□□ 0.97
APPP05067 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.09■□□□□ 0.97
APPP05067 MTDHP3-201ENST00000594186 672 ntBASIC21.09■□□□□ 0.97
APPP05067 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
APPP05067 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.09■□□□□ 0.97
APPP05067 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APPP05067 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms