Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2ABP04908 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 KRT18P38-201ENST00000449496 1282 ntBASIC16.06■□□□□ 0.16
HIST1H2ABP04908 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 AC006011.2-201ENST00000621313 1158 ntBASIC16.06■□□□□ 0.16
HIST1H2ABP04908 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2ABP04908 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 AC005332.3-201ENST00000589904 676 ntBASIC16.05■□□□□ 0.16
HIST1H2ABP04908 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2ABP04908 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms