Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC079602.3-201ENST00000623931 403 ntBASIC15.83■□□□□ 0.12
HLA-DQA2P01906 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.83■□□□□ 0.12
HLA-DQA2P01906 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA2P01906 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 AC113347.1-201ENST00000413321 391 ntBASIC15.82■□□□□ 0.12
HLA-DQA2P01906 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 BX664615.1-201ENST00000443558 458 ntBASIC15.82■□□□□ 0.12
HLA-DQA2P01906 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 ZNF444P1-201ENST00000559497 298 ntBASIC15.82■□□□□ 0.12
HLA-DQA2P01906 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 AC139887.4-201ENST00000607877 719 ntBASIC15.82■□□□□ 0.12
HLA-DQA2P01906 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 AC004263.2-201ENST00000617183 678 ntBASIC15.82■□□□□ 0.12
HLA-DQA2P01906 AC011558.1-201ENST00000623459 338 ntBASIC15.82■□□□□ 0.12
HLA-DQA2P01906 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA2P01906 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 HLA-J-201ENST00000462773 1622 ntBASIC15.81■□□□□ 0.12
HLA-DQA2P01906 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 AC073912.3-201ENST00000624414 853 ntBASIC15.81■□□□□ 0.12
HLA-DQA2P01906 AL138688.1-201ENST00000624851 1594 ntBASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DQA2P01906 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA2P01906 LINC00304-203ENST00000565008 1864 ntBASIC15.8■□□□□ 0.12
HLA-DQA2P01906 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms