Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CD4P01730 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CD4P01730 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CD4P01730 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD4P01730 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.35■□□□□ 0.69
CD4P01730 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CD4P01730 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.34■□□□□ 0.69
CD4P01730 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 PTCHD3P3-201ENST00000403073 906 ntBASIC19.34■□□□□ 0.69
CD4P01730 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.34■□□□□ 0.69
CD4P01730 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.34■□□□□ 0.69
CD4P01730 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.34■□□□□ 0.69
CD4P01730 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
CD4P01730 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.34■□□□□ 0.69
CD4P01730 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.34■□□□□ 0.69
CD4P01730 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
CD4P01730 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD4P01730 HCG11-201ENST00000411553 5696 ntBASIC19.34■□□□□ 0.69
CD4P01730 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD4P01730 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD4P01730 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CD4P01730 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD4P01730 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.33■□□□□ 0.69
CD4P01730 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.33■□□□□ 0.69
CD4P01730 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CD4P01730 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CD4P01730 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 AP002414.1-201ENST00000391405 1147 ntBASIC19.33■□□□□ 0.68
CD4P01730 AL035633.1-201ENST00000406139 838 ntBASIC19.33■□□□□ 0.68
CD4P01730 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 FAM58CP-201ENST00000435741 640 ntBASIC19.33■□□□□ 0.68
CD4P01730 AC074386.1-202ENST00000463561 864 ntBASIC19.33■□□□□ 0.68
CD4P01730 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CD4P01730 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.33■□□□□ 0.68
CD4P01730 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CD4P01730 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CD4P01730 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.33■□□□□ 0.68
CD4P01730 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CD4P01730 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.33■□□□□ 0.68
CD4P01730 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
CD4P01730 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD4P01730 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CD4P01730 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD4P01730 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.32■□□□□ 0.68
CD4P01730 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CD4P01730 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.32■□□□□ 0.68
CD4P01730 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.32■□□□□ 0.68
CD4P01730 GGTLC5P-201ENST00000617623 998 ntBASIC19.32■□□□□ 0.68
CD4P01730 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.32■□□□□ 0.68
CD4P01730 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.32■□□□□ 0.68
CD4P01730 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CD4P01730 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.32■□□□□ 0.68
CD4P01730 AC025580.3-201ENST00000617932 1424 ntBASIC19.32■□□□□ 0.68
CD4P01730 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.32■□□□□ 0.68
CD4P01730 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CD4P01730 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD4P01730 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.31■□□□□ 0.68
CD4P01730 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD4P01730 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms