Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
IFNA1P01562 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
IFNA1P01562 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.95□□□□□ -0.18
IFNA1P01562 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
IFNA1P01562 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 AC092368.3-202ENST00000574180 1591 ntBASIC13.95□□□□□ -0.18
IFNA1P01562 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.95□□□□□ -0.18
IFNA1P01562 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.95□□□□□ -0.18
IFNA1P01562 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IFNA1P01562 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFNA1P01562 AL163051.1-201ENST00000569214 1512 ntBASIC13.95□□□□□ -0.18
IFNA1P01562 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.95□□□□□ -0.18
IFNA1P01562 GPAT2P1-201ENST00000444924 1672 ntBASIC13.95□□□□□ -0.18
IFNA1P01562 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.94□□□□□ -0.18
IFNA1P01562 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.94□□□□□ -0.18
IFNA1P01562 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.94□□□□□ -0.18
IFNA1P01562 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
IFNA1P01562 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.94□□□□□ -0.18
IFNA1P01562 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.94□□□□□ -0.18
IFNA1P01562 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.94□□□□□ -0.18
IFNA1P01562 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.94□□□□□ -0.18
IFNA1P01562 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 HYMAI-201ENST00000635591 3347 ntBASIC13.94□□□□□ -0.18
IFNA1P01562 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
IFNA1P01562 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
IFNA1P01562 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
IFNA1P01562 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
IFNA1P01562 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.93□□□□□ -0.18
IFNA1P01562 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.93□□□□□ -0.18
IFNA1P01562 AC005915.1-201ENST00000624912 2018 ntBASIC13.93□□□□□ -0.18
IFNA1P01562 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IFNA1P01562 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.93□□□□□ -0.18
IFNA1P01562 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.93□□□□□ -0.18
IFNA1P01562 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IFNA1P01562 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms