Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.92■□□□□ 0.78
ALDH1A1P00352 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.92■□□□□ 0.78
ALDH1A1P00352 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALDH1A1P00352 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.91■□□□□ 0.78
ALDH1A1P00352 AC008677.1-201ENST00000519230 1561 ntBASIC19.91■□□□□ 0.78
ALDH1A1P00352 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.91■□□□□ 0.78
ALDH1A1P00352 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.91■□□□□ 0.78
ALDH1A1P00352 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.91■□□□□ 0.78
ALDH1A1P00352 AL596325.1-201ENST00000563991 1082 ntBASIC19.91■□□□□ 0.78
ALDH1A1P00352 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.91■□□□□ 0.78
ALDH1A1P00352 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALDH1A1P00352 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 SPCS2P4-201ENST00000436160 681 ntBASIC19.9■□□□□ 0.78
ALDH1A1P00352 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 AC097493.3-201ENST00000509725 367 ntBASIC19.9■□□□□ 0.78
ALDH1A1P00352 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 SPDYE22P-201ENST00000582158 798 ntBASIC19.9■□□□□ 0.78
ALDH1A1P00352 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 AL662799.1-202ENST00000614205 422 ntBASIC19.9■□□□□ 0.78
ALDH1A1P00352 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALDH1A1P00352 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ALDH1A1P00352 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
ALDH1A1P00352 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.89■□□□□ 0.77
ALDH1A1P00352 AC009118.2-201ENST00000613275 655 ntBASIC19.89■□□□□ 0.77
ALDH1A1P00352 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 AC084121.4-201ENST00000641598 221 ntBASIC19.89■□□□□ 0.77
ALDH1A1P00352 AF228730.8-201ENST00000642140 221 ntBASIC19.89■□□□□ 0.77
ALDH1A1P00352 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALDH1A1P00352 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 SPDYE14P-201ENST00000442619 822 ntBASIC19.88■□□□□ 0.77
ALDH1A1P00352 SLC25A6P2-201ENST00000497974 877 ntBASIC19.88■□□□□ 0.77
ALDH1A1P00352 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALDH1A1P00352 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.88■□□□□ 0.77
ALDH1A1P00352 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms