Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRAMEF4O60810 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF4O60810 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 RCN1P2-201ENST00000398357 915 ntBASIC16.9■□□□□ 0.3
PRAMEF4O60810 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF4O60810 INTS4P1-201ENST00000438455 1935 ntBASIC16.9■□□□□ 0.3
PRAMEF4O60810 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF4O60810 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF4O60810 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF4O60810 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
PRAMEF4O60810 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PRAMEF4O60810 PCDHA12-202ENST00000613593 2588 ntBASIC16.89■□□□□ 0.3
PRAMEF4O60810 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF4O60810 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 AL353593.2-201ENST00000602529 1483 ntBASIC16.89■□□□□ 0.29
PRAMEF4O60810 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 VENTXP7-201ENST00000475503 772 ntBASIC16.89■□□□□ 0.29
PRAMEF4O60810 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 AC074051.2-201ENST00000565115 352 ntBASIC16.89■□□□□ 0.29
PRAMEF4O60810 Z69720.1-201ENST00000601483 472 ntBASIC16.89■□□□□ 0.29
PRAMEF4O60810 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF4O60810 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF4O60810 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 AC116353.5-201ENST00000638148 1699 ntBASIC16.88■□□□□ 0.29
PRAMEF4O60810 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF4O60810 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PRAMEF4O60810 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms